SubtiBank SubtiBank
yfnH [2019-07-25 08:48:55]
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yfnH [2019-07-25 08:48:55]

similar to glucose-1-phosphate cytidylyltransferase
Locus
BSU_07270
Isoelectric point
5.49
Molecular weight
28.52 kDa
Protein length
254 aa Sequence Blast
Gene length
765 bp Sequence Blast
Function
unknown
Product
unknown
Essential
no
E.C.
2.7.7.33
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Lifestyles → Sporulation → Sporulation proteins → Sporulation proteins/ other
  • Groups of genes → Poorly characterized/ putative enzymes

    • Gene

    Coordinates
    798,469 → 799,233

    The protein

    Protein family

  • cytidylyltransferase family (with IspD and TagD, according to UniProt)
  • glucose-1-phosphate cytidylyltransferase family (single member, according to UniProt)

    • Structure

  • 1TZF (from Salmonella Typhi, 43% identity)

    • Expression and Regulation

    Operons

    Genes
    yfnH-yfnG-yfnF-yfnE-yfnD
    Description
    PubMed

    Sigma factors

  • SigK: sigma factor, PubMed, in SigK regulon
  • SigE: sigma factor, internal promoter in YfnE open reading frame PubMed, see DBTBS for details, in SigE regulon

    • Regulatory mechanism

  • GerE: activation, PubMed, in GerE regulon

    • Regulation

  • expressed during sporulation (SigK) PubMed
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    Biological materials

    Mutant

  • MGNA-C227 (yfnH::erm), available at the NBRP B. subtilis, Japan
  • BKE07270 (ΔyfnH::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATCTCTACCCCTCATCTCT, downstream forward: _UP4_GTATGGAAGGTATGGTGAAT
  • BKK07270 (ΔyfnH::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATCTCTACCCCTCATCTCT, downstream forward: _UP4_GTATGGAAGGTATGGTGAAT

    • References

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